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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs61364424 chr6:36031906 A/G 1.0E-9 406 15.67 14.95 6.15 KM Plot
LGG rs61365082 chr15:31956877 T/C 0.000167 402 15.77 15.2 11.8 KM Plot
LGG rs61398471 chr16:67878685 ATT/A 2.16E-11 407 15.17 18.37 6.47 KM Plot
LGG rs61446315 chr3:100915377 TG/T 2.3E-7 406 15.67 14.98 10.07 KM Plot
LGG rs61458963 chr1:219171209 GTA/G 0.000173 406 14.77 19.03 18.63 KM Plot
LGG rs61558997 chr1:153532811 G/A 3.9E-12 405 15.18 17.73 7.32 KM Plot
LGG rs61561287 chr2:29247510 C/G 0.000157 401 14.5 20.97 4.15 KM Plot
LGG rs61600621 chr10:122083762 T/C 7.99E-8 399 15.17 15.35 14.82 KM Plot
LGG rs61605492 chr14:23325863 T/TA 3.93E-5 400 11.17 15.7 15.73 KM Plot
LGG rs61759676 chr4:47621506 T/C 3.72E-6 398 14.53 16.82 16.3 KM Plot
LGG rs61759681 chr4:47627139 T/C 3.72E-6 398 14.53 16.82 16.3 KM Plot
LGG rs61763101 chr6:35996413 C/T 9.5E-10 407 15.6 15.17 6.15 KM Plot
LGG rs61790910 chr3:153660987 C/T 0 407 15.17 16.77 0.23 KM Plot
LGG rs61790911 chr3:153661818 C/T 0 407 15.17 16.77 0.23 KM Plot
LGG rs61790953 chr3:153662165 T/C 0 406 15.17 17.07 0.23 KM Plot